esearch
Perform a new Entrez search using terms in indexed fields. It is part of the
edirect
package. More information: https://www.ncbi.nlm.nih.gov/books/NBK179288/.
- Search the pubmed database for selective serotonin reuptake inhibitor:
esearch -db pubmed -query "{{selective serotonin reuptake inhibitor}}"
- Search the protein database using a query and regexp:
esearch -db {{protein}} -query {{'Escherichia*'}}
- Search the nucleotide database for sequences whose metadata contain insulin and rodents:
esearch -db nuccore -query "{{insulin [PROT] AND rodents [ORGN]}}"
- Display [h]elp:
esearch -h